![]() This blog post includes detailed information on how to set up your screen to follow along during the workshop.ĭownload and install CellProfiler for Mac or Windows. Try it out in advance to decide what will work best for you. Will it work better for you to toggle between them How can you best fit both on your screen? (the video conference program and one of the tools you will be using Divide your screen: If you only have one deviceĪnd one screen, practice having two windows.To follow along with the tool you will be learning about. Sized screen? If so, try using the smaller device as your videoĬonference connection and your larger device (laptop or desktop) Two devices: If you don't have two monitors,ĭo you have another device (tablet, smartphone) with a medium to large. ![]() The video conferencing software on the other. Plan to have the tool you are learning up on one monitor and Python 46 53 CellProfiler-Analyst Public Open-source software for exploring and analyzing large, high-dimensional image-derived data. Two monitors: If you have two monitors, An open-source application for biological image analysis Python 763 353 CellProfiler-plugins Public Community-contributed and experimental CellProfiler modules.We recommend using one of the following set up options: You will be learning about (a terminal, RStudio, your web browser, etc.)Īnd the window for the Zoom video conference client open. To do this, you will need to have both the window for the tool You will be learning by "coding along" with the Instructors. To download and install the Zoom client for your computer. If you haven't used Zoom before, go to the We maintain a list of common issues that occur during installation as a reference for instructorsĬonfiguration Problems and Solutions wiki page. In addition, you will need an up-to-date web browser. You will need access to software as described below. Please be sure to complete this survey after the workshop. To learn more about the roles at the workshop (who will be doing what), Notify the instructors in advance of the workshop if you require any accommodations or if there isĪnything we can do to make this workshop more accessible to you. We are dedicated to providing a positive and accessible learning environment for all. They should have a few specific software packages installed (listed below). Mac, Linux, or Windows operating system (not a tablet, Chromebook, etc.). The instructors will provide you with the information you will need to connect to this meeting. Where: This training will take place online. Explore your data and classify complex or subtle phenotypes using machine learning in CellProfiler Analyst.Export your data to a spreadsheet or database.Process images automatically - even millions.Adjust the settings to measure the phenotypes of interest in your images.Load an example CellProfiler pipeline, a series of image-processing modules.It is designed for biologists and no prior experience in programming or computer vision is required. General InformationĬellProfiler is free, open-source software for quantitative analysis of biological images. Registration box below, please check your adblocker settings. Some adblockers block the registration window.
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